PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_2BS_1B0F27580.2
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bZIP
Protein Properties Length: 316aa    MW: 35758.4 Da    PI: 9.5268
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_2BS_1B0F27580.2genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_130.86.5e-101559549
                           CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                 bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49
                           kr++r   NR +A rs +RK  +i eLe+kv +L++e ++L  +l
  Traes_2BS_1B0F27580.2 15 KRAKRILANRQSAARSKERKARYITELERKVHTLQTEATTLSAQL 59
                           9***************************************99766 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.9E-141175IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.3461376IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.1E-71560No hitNo description
PfamPF001701.5E-81560IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.97E-101566No hitNo description
CDDcd147031.78E-201665No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    Send to blast
MSSEQLSELA SVDPKRAKRI LANRQSAARS KERKARYITE LERKVHTLQT EATTLSAQLM  60
LFQRDTTGLS AENTELKIRL QAMEQQAQLR DALNNTLKQE LERLKIATGE MTKPDEAYNT  120
GMHHVPYNPS FFQLSEQHTP QHHSSVHQLP SQFQPPHPNV PSHQMLSHPN TFPDMMQQDS  180
LGRFQGLDIG KGSVAVKLEA EAAAKSEGSS ISADWGLSDH TMCLVQAREE EKVAYCHRPC  240
RRRWMTDGCR GWLATKKCSA ILSRRMEIPA SLLTVEGDHR RHCPWRRRER AGRRQAEGGQ  300
GRSPALLNAA RAEENI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1279294RRHCPWRRRERAGRRQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3749000.0AK374900.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv3079L07.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003562448.11e-125PREDICTED: transcription factor RF2b-like
RefseqXP_006658967.21e-126PREDICTED: transcription factor RF2b-like
SwissprotQ6S4P41e-101RF2B_ORYSJ; Transcription factor RF2b
TrEMBLW5BIL80.0W5BIL8_WHEAT; Uncharacterized protein
STRINGMLOC_44311.11e-150(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP26833683
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40620.11e-63bZIP family protein
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]